The great Anglican theologian, Francis H. Hall, in his Dogmatic Theology, put it best when he stated that faith is a form of reason. If it is a form of reason, it cannot be opposed to reason as such. He writes, "Faith is not an independent faculty separate or separable from reason, but is reason itself insofar as reason is exercised on divine things and is assisted by supernatural grace. The act of faith is an act of reason, conforming strictly to the laws of human reason in general." The whole chapter on the relation between faith and reason in Vol.1 of his magnum opus is worth reading and rereading, and although written in 1912 still very much relevant to many of these arguments we face today.
It is essential that the Church not let these people speak for us, and suggest to the world that if one lives a life of faith - i.e. if one is a Christian - he is therefore by definition "opposed" to science and reason. Further, Christians would do well to learn to critically evaluate the arguments and ideas presented by atheists and others, so they can correct them when they say these inaccurate and false things.